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Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

December 25, 2015
eLife
A general strategy to construct small molecule biosensors in eukaryotes.

Feng J, Jester BW, Tinberg CE, Mandell DJ, Antunes MS, Chari R, Morey KJ, Rios X, Medford JI, Church GM, Fields S, Baker D
June 12, 2015
Science Advances
Transplantability of a circadian clock to a noncircadian organism.

Chen AH, Lubkowicz D, Yeong V, Chang RL, Silver PA
December 21, 2015
Nature Methods
Small airway-on-a-chip enables analysis of human lung inflammation and drug responses in vitro.

Benam KH, Villenave R, Lucchesi C, Varone A, Hubeau C, Lee HH, Alves SE, Salmon M, Ferrante TC, Weaver JC, Bahinski A, Hamilton GA, Ingber DE
June 17, 2016
ACS Synthetic Biology
Converting a natural protein compartment into a nanofactory for the size-constrained synthesis of antimicrobial silver nanoparticles.

Giessen TW, Silver PA
September 3, 2015
Nucleic Acids Research
Synthetic biosensors for precise gene control and real-time monitoring of metabolites.

Rogers JK, Guzman CD, Taylor ND, Raman S, Anderson K, Church GM
September 22, 2015
PNAS
Active mixing of complex fluids at the microscale.

Ober TJ, Foresti D, Lewis JA
October 12, 2014
Nature Methods
A DNA-based molecular probe for optically reporting cellular traction forces

Blakely BL, Dumelin CE, Trappmann B, McGregor LM, Choi CK, Anthony PC, Duesterberg VK, Baker BM, Block SM, Liu DR, Chen CS
December 4, 2014
Nature
Deconstructing transcriptional heterogeneity in pluripotent stem cells.

Kumar RM, Cahan P, Shalek AK, Satija R, DaleyKeyser AJ, Li H, Zhang J, Pardee K, Gennert D, Trombetta JJ, Ferrante TC, Regev A, Daley GQ, Collins JJ
February 9, 2016
PNAS
Biologic-free mechanically induced muscle regeneration.

Cezar CA, Roche ET, Vandenburgh HH, Duda GN, Walsh CJ, Mooney DJ
January 25, 2016
Nature Materials
Biomimetic 4D printing.

Sydney Gladman A, Matsumoto EA, Nuzzo RG, Mahadevan L, Lewis JA
December 4, 2014
ACS Biomaterials Science & Engineering
Liquid-Infused Silicone As a Biofouling-Free Medical Material

MacCallum, N., Howell, C., Kim, P., Sun, D., Friedlander, R., Ranisau, J., Ahanotu, O., Lin, J.J., Vena, A., Hatton, B., Wong, T.-S., Aizenberg, J.
May 16, 2016
PNAS
Laser-assisted direct ink writing of planar and 3D metal architectures

Mark A. Skylar-Scott, Suman Gunasekaran, and Jennifer A. Lewis
October 9, 2014
Science
Casting inorganic structures with DNA molds

Wei Sun, Etienne Boulais, Yera Hakobyan, Wei Li Wang, Amy Guanl, Mark Bathe, Peng Yin
December 8, 2014
Nature Methods
DNA nanoswitches: a quantitative platform for gel-based biomolecular interaction analysis.

Koussa MA, Halvorsen K, Ward A, Wong WP
October 22, 2015
Stroke
Shear-Activated Nanoparticle Aggregates Combined With Temporary Endovascular Bypass to Treat Large Vessel Occlusion.

Marosfoi MG, Korin N, Gounis MJ, Uzun O, Vedantham S, Langan ET, Papa AL, Brooks OW, Johnson C, Puri AS, Bhatta D, Kanapathipillai M, Bronstein BR, Chueh JY, Ingber DE, Wakhloo AK
September 7, 2015
Nature Methods
Cas9 gRNA engineering for genome editing, activation and repression.

Kiani S, Chavez A, Tuttle M, Hall RN, Chari R, Ter-Ovanesyan D, Qian J, Pruitt BW, Beal J, Vora S, Buchthal J, Kowal EJ, Ebrahimkhani MR, Collins JJ, Weiss R, Church G
September 14, 2015
Nature Materials
Matrix elasticity of void-forming hydrogels controls transplanted-stem-cell-mediated bone formation.

Huebsch N, Lippens E, Lee K, Mehta M, Koshy ST, Darnell MC, Desai RM, Madl CM, Xu M, Zhao X, Chaudhuri O, Verbeke C, Kim WS, Alim K, Mammoto A, Ingber DE, Duda GN, Mooney DJ
May 19, 2016
Cell
Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components

Pardee K, Green AA, Takahashi MK, Braff D, Lambert G, Lee JW, Ferrante T, Ma D, Donghia N, Fan M, Daringer NM, Bosch I, Dudley DM, O'Connor DH, Gehrke L, Collins JJ
September 23, 2015
Science Translational Medicine
A light-reflecting balloon catheter for atraumatic tissue defect repair.

Roche ET, Fabozzo A, Lee Y, Polygerinos P, Friehs I, Schuster L, Whyte W, Casar Berazaluce AM, Bueno A, Lang N, Pereira MJ, Feins E, Wasserman S, O'Cearbhaill ED, Vasilyev NV, Mooney DJ, Karp JM, Del Nido PJ, Walsh CJ
March 4, 2015
Nature
Liquid-based gating mechanism with tunable multiphase selectivity and antifouling behaviour.

Hou X, Hu Y, Grinthal A, Khan M, Aizenberg J